Details on Gene Families
abi60 ABI3-VP1-transcription factor 60
See the complete record for abi60 ABI3-VP1-transcription factor 60. Notes: no NCBI or v3 models B73 bp coordinates support Genetic cM (EHC Oct 2023) Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: There are no noted references available for this transgene. acad acylcoenzyme A dehydrogenase See the complete record for acad acylcoenzyme A dehydrogenase. Notes: reserved for gene family encoding acylCoA dehydrogenases; currently no published gene information for maize (2008). Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (identification) Bode, K et al. 1999. Plant Physiol 119:1305-1314 Identification, separation, and characterization of acyl-coenzyme A dehydrogenases involved in mitochondrial beta-oxidation in higher plants ars1 autonomously replicating sequence1 See the complete record for ars1 autonomously replicating sequence1. Notes: replicates in yeast; 11,000 copies in maize Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Berlani, RE et al. 1988. Plant Mol Biol 11:173-182 Sequence analysis of three fragments of maize nuclear DNA which replicate autonomously in yeast ars2 autonomously replicating sequence2 See the complete record for ars2 autonomously replicating sequence2. Notes: replicates in yeast; 10,000 copies in maize Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Berlani, RE et al. 1988. Plant Mol Biol 11:173-182 Sequence analysis of three fragments of maize nuclear DNA which replicate autonomously in yeast ars3 autonomously replicating sequence3 See the complete record for ars3 autonomously replicating sequence3. Notes: replicates in yeast; 28,000 copies in maize Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Berlani, RE et al. 1988. Plant Mol Biol 11:173-182 Sequence analysis of three fragments of maize nuclear DNA which replicate autonomously in yeast CACTA See the complete record for CACTA . Notes: transposable element family with CACTA in a 13 bp terminal inverted repeat and a 3 bp target site duplication; includes En/Spm, doppia, others family includes En/Spm, doppia of maize; Tam1 of Antirrhinum; Tgm1 of soybean; Pis1 of Pisum. Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Pereira, A et al. 1986. EMBO J 5:835-841 Molecular analysis of the En/Spm transposable element system of Zea mays (Genelist) Masson, P et al. 1987. Genetics 117:117-137 Genetic and molecular analysis of the Spm-dependent a-m2 alleles of the maize a locus (Genelist) Techen, N et al. 1999. MNL 73:35-36 Isolation of two new CACTA transposable elements from anthocyanin genes in maize (mapping) Roy, NS et al. 2017. Genetica pp.doi: 10.1007/s10709-017-9985-7 Development of CACTA transposon derived SCAR markers and their use in population structure analysis in Zea mays (description) Yang, Q et al. 2013. Proc Natl Acad Sci, USA 110:16969-16974 CACTA-like transposable element in ZmCCT attenuated photoperiod sensitivity and accelerated the postdomestication spread of maize (methylation) ChenXi Gao et al. 2024. Analysis of Transposable Element Associated Epigenetic Regulation under Drought in Maize Sci Agric Sin. 57:1034-1048.. Analysis of Transposable Element Associated Epigenetic Regulation under Drought in Maize colonist1 See the complete record for colonist1 . Notes: family of elements containing reverse transcriptase domain (LINE-like); originally found in ACCase B1 and B2 genes; high sequence identity to largest (1.8kb) intron of sh2 Family Members: LINE Long Interspersed Nuclear Elements Family Other Related Loci: Homologous sh2 intron 1.8kb References: (first report) Lutz, S and Gengenbach, BG. 1996. MNL 70:59 Characterization of two unique Long Interspersed Nuclear Elements (LINEs), colonist1 and colonist2 colonist2 See the complete record for colonist2 . Notes: family of elements containing reverse transcriptase sequence (LINE-like), similar to Cin4; 100-500 copies in genome; originally found in ACCase genes B1 and B2 (as an insertion in colonist1) Family Members: LINE Long Interspersed Nuclear Elements Family Other Related Loci: Homologous Cin4 References: (first report) Lutz, S and Gengenbach, BG. 1996. MNL 70:59 Characterization of two unique Long Interspersed Nuclear Elements (LINEs), colonist1 and colonist2 elfa8 elongation factor alpha8 See the complete record for elfa8 elongation factor alpha8. Notes: probably identical to elfa7 shares 82-99% nucleotide sequence identity with genes elf1a to elf1f (aka clones eEF1Aa to eEF1Af). Ambiguous BLAST matches among the members clustered in Entrez Unigene Zm.70437 with AF136829 Genetic coordinate based on BAC match in B73 v2 (EHC Apr 2014) Match of the gene-specific 3' sequence of Carneiro et al. (1999) places this locus (EH Coe December 2008) Family Members: There are no noted family members available for this transgene. Other Related Loci: possibly identical elfa7 References: (gene expression) Carneiro, N et al. 1999. Plant Mol Biol 41:801-813 The eEFlA gene family is differentially expressed in maize endosperm (cDNA sequence) Carneiro, N et al. 1999. Plant Mol Biol 41:801-813 The eEFlA gene family is differentially expressed in maize endosperm his1 histone I See the complete record for his1 histone I. Notes: histone H1 gene family, cDNA sequence Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Razafimahatratra, P et al. 1991. Nucl Acid Res 19:1491-1496 Nucleotide sequence and expression of a maize H1 histone cDNA (evolution) Chaboute, ME; Chaubet, N; Gigot, C; Philipps, G. 1993. Biochimie 75:523-531 Histones and histone genes in higher plants: structure and genomic organization his3 histone3 See the complete record for his3 histone3. Notes: promoter has two plant histone conserved motifs required for cell-division induced interactons: CCATC-CAACGGCPu and CCGTCC; and has a required cis-element, CGCGGATC, 10-3- bp upstream from the CCGTCC element histone H3 family, 60-80 copies/diploid genome, homologous sites on several chromosomes, subfamilies H3C2, H3C3, H3C4 Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Chaubet, N et al. 1989. Mol Gen Genet 219:404-412 Organization of the histone H3 and H4 multigenic families in maize and in related genomes (Variation) Chaubet, N. 1986. Plant Mol Biol 6:253-263 Nucleotide sequences of two corn histone H3 genes (Variation) Chaubet, N. 1988. Nucl Acid Res 16:1295-1304 (Variation) Gigot, C and Chaubet, N. 1987. Plant Physiol Biochem 25:235-247 Nucleotide sequences of two histone H3 and H4 genes of corn. Further insight into the structure and organization of the histone genes in higher plants (Variation) Chaubet, N et al. 1987. Dev Genet 8:461-473 (transgenic expression) Brignon, P et al. 1993. Plant Mol Biol 22:1007-1015 Nuclease sensitivity and functional analysis of a maize histone h3 gene promoter (promoter analysis) Brignon, P et al. 1993. Plant Mol Biol 22:1007-1015 Nuclease sensitivity and functional analysis of a maize histone h3 gene promoter (promoter analysis) Brignon, P and Chaubet, N. 1993. Plant J 4:445-457 Constitutive and cell-division-inducible protein-DNA interactions in two maize histone gene promoters (codon usage) Fennoy, SL and Bailey-Serres, J. 1993. Nucl Acid Res 21:5294-5300 Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C-ending and G-ending codons (evolution) Chaboute, ME; Chaubet, N; Gigot, C; Philipps, G. 1993. Biochimie 75:523-531 Histones and histone genes in higher plants: structure and genomic organization (gene product) Savenkova, TN. 1995. Subfraction composition of histones and methylation of DNA in inbred maize lines and their hybrids. Fiziol Biokh Kult Rast 27:189-193 Subfraction composition of histones and methylation of DNA in inbred maize lines and their hybrids (embryogenesis) Sauter, M et al. 1998. Sex Plant Reprod 11: 41-48 Cell cycle regulatory genes from maize are differentially controlled during fertilization and first embryonic cell division (transgenic expression) Atanassova, R et al. 1998. Plant Mol Biol 37:275-285 Functional analysis of the promoter region of a maize (Zea mays L.) H3 histone gene in transgenic Arabidopsis thaliana (promoter analysis) Atanassova, R et al. 1998. Plant Mol Biol 37:275-285 Functional analysis of the promoter region of a maize (Zea mays L.) H3 histone gene in transgenic Arabidopsis thaliana (gene expression) Peres, A et al. 1999. J Exp Bot 50:1373-1379 Partial synchronization of cell division in cultured maize (Zea mays L.) cells: differential cyclin, cdc2, histone, and retinoblastoma transcript accumulation during the cell cycle (phosphorylation) Kaszas, E and Cande, WZ. 2000. J Cell Sci 113:3217-3226 Phosphorylation of histone H3 is correlated with changes in the maintenance of sister chromatid cohesion during meiosis in maize, rather than the condensation of the chromatin his4 histone4 family See the complete record for his4 histone4 family. Notes: promoter has two plant histone conserved motifs required for cell-division induced interactons: CCATC-CAACGGCPu and CCGTCC; and has a required cis-element, CGCGGATC, 10-3- bp upstream from the CCGTCC element histone H4 family; 100-120 copies/diploid genome (Chaubet et al 1986), homologous sites on most chromosomes, subfamilies H4C7, H4C14 Transcripts described (Gigot et al. 1987). Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Chaubet, N et al. 1989. Mol Gen Genet 219:404-412 Organization of the histone H3 and H4 multigenic families in maize and in related genomes (Genelist) Chaubet, N. 1986. Plant Mol Biol 6:253-263 Nucleotide sequences of two corn histone H3 genes (Variation) Philipps, G et al. 1986. Gene 42:225-229 Genomic organization and nucleotide sequences of two corn histone H4 genes (Variation) Phillips, RL et al. 1974. Genetics 77:285-297 The nucleolus organizer region of maize (Zea mays L.): tests for ribosomal gene compensation or magnification (promoter analysis) Brignon, P and Chaubet, N. 1993. Plant J 4:445-457 Constitutive and cell-division-inducible protein-DNA interactions in two maize histone gene promoters (codon usage) Fennoy, SL and Bailey-Serres, J. 1993. Nucl Acid Res 21:5294-5300 Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C-ending and G-ending codons (evolution) Chaboute, ME; Chaubet, N; Gigot, C; Philipps, G. 1993. Biochimie 75:523-531 Histones and histone genes in higher plants: structure and genomic organization (gene product) Savenkova, TN. 1995. Subfraction composition of histones and methylation of DNA in inbred maize lines and their hybrids. Fiziol Biokh Kult Rast 27:189-193 Subfraction composition of histones and methylation of DNA in inbred maize lines and their hybrids (gene expression) Peres, A et al. 1999. J Exp Bot 50:1373-1379 Partial synchronization of cell division in cultured maize (Zea mays L.) cells: differential cyclin, cdc2, histone, and retinoblastoma transcript accumulation during the cell cycle iaa50 Aux/IAA-transcription factor50 See the complete record for iaa50 Aux/IAA-transcription factor50. Notes: B73 bp coordinates support Genetic cM (EHC Oct 2023) Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: There are no noted references available for this transgene. MADS-box MADS-box gene family See the complete record for MADS-box MADS-box gene family. Notes: genes belonging to this gene family contain a MADS-box protein domain with DNA-binding properties. Family Members: zmm16 Zea mays MADS16 zmm1 Zea mays MADS1 zag2 Zea AGAMOUS homolog2 zmm31 Zea mays MADS31 zmm29 Zea mays MADS29 zmm18 Zea mays MADS18 zmm2 Zea mays MADS2 zmm6 Zea mays MADS6 zag1 Zea AGAMOUS homolog1 Other Related Loci: There are no noted related loci available for this transgene. References: (phylogenetic analysis) Theissen, G; Strater, T; Fischer, A; Saedler, H. 1995. Gene 156:155-166 Structural characterization, chromosomal localization and phylogenetic evaluation of two pairs of AGAMOUS-like MADS-box genes from maize (evolution) Fischer, A et al. 1995. MNL 69:37 Genomic organization of MADS-box genes (duplication) Fischer, A et al. 1995. MNL 69:37 Genomic organization of MADS-box genes (gene expression) Fischer, A et al. 1995. MNL 69:37 Differential expression of MADS-box genes (RNA splicing) Montag, K; Salamini, F; Thompson, RD. 1995. Nucl Acid Res 23:2168-2177 ZEMa, a member of a novel group of MADS box genes, is alternatively spliced in maize endosperm (comparison) Akopian, T et al. 2000. Conserved fragments of the MADS-box genes in perennial and annual rye. Fiziol Rast 47:89-96 Conserved fragments of the MADS-box genes in perennial and annual rye (sequence analysis) Ermishev, VY et al. 2000. An unusual K-box sequence of a maize MADS-box gene. Fiziol Rast 47:555-557 An unusual K-box sequence of a maize MADS-box gene (tissue-specific expression) Datta, R et al. 2001. Sex Plant Reprod 14:127-134 Gene-expression analysis of sucrose-starch metabolism during pollen maturation in cytoplasmic male-sterile and fertile lines of sorghum mcm minichromosome maintenance family protein See the complete record for mcm minichromosome maintenance family protein. Notes: There are no notes available for this transgene. Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (first report) Richert, J et al. 1996. Plant Sci 114:93-99 A reverse transcriptase-polymerase chain reaction assay for gene expression studies at the single cell level mpu maize palindromic unit See the complete record for mpu maize palindromic unit. Notes: family of sequences occurring upstream of zein gene(s), cat3, and kn1, with potential homology to reverse transcriptases; 17- to 21- bp perfect palindromes, copy number 30,000 Family Members: There are no noted family members available for this transgene. Other Related Loci: Near kn1 Near zp Near cat3 References: (first report) Prostko, JC and Quayle, TJA. 1995. MNL 69:82-83 Analysis of a palindromic DNA sequence motif rDNA18S 18S ribosomal RNA See the complete record for rDNA18S 18S ribosomal RNA. Notes: NOR (nucleolus organizer) component Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Jupe, ER and Zimmer, E. 1990. Plant Mol Biol 14:333-347 Unmethylated regions in the intergenic spacer of maize and teosinte ribosomal RNA genes (nucleotide sequence) Doyle, JA. 1994. Ann Mo Bot Gard :(in press) (Probe) Kato, A; Lamb, JC; Birchler, J. 2004. Proc Natl Acad Sci, USA. 101:13554-13559 Chromosome painting using repetitive DNA sequences as probes for somatic chromosome identification in maize rDNA25S 25S ribosomal RNA See the complete record for rDNA25S 25S ribosomal RNA. Notes: Mapped in silico by inference from BAC sequence and RFLP matches (EH Coe Jul 2008) NOR (nucleolar organizer) component Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Jupe, ER and Zimmer, E. 1990. Plant Mol Biol 14:333-347 Unmethylated regions in the intergenic spacer of maize and teosinte ribosomal RNA genes (evolution) Jupe, ER; Zimmer, EA pp.541-552 in Zimmer, E et al. 1993.Academic Press, San Diego Assaying differential ribosomal RNA gene expression with allele-specific probes (Probe) Riera-Lizarazu, O et al. 1996. Theor Appl Genet 93:123-135 Cytological and molecular characterization of oat x maize partial hybrids (FISH) Chen, CC et al. 2000. Theor Appl Genet 101:30-36 The pachytene chromosomes of maize as revealed by fluorescence in situ hybridization with repetitive DNA sequences (Probe) Kato, A; Lamb, JC; Birchler, J. 2004. Proc Natl Acad Sci, USA. 101:13554-13559 Chromosome painting using repetitive DNA sequences as probes for somatic chromosome identification in maize rDNA45S 45S ribosomal RNA See the complete record for rDNA45S 45S ribosomal RNA. Notes: NOR (nucleolus organizer) component nucleolar chromatin mainly includes tandemly-arranged 45S ribosomal RNA genes, which are called nucleolar organizers and are transcribed by RNA polymerase I to generate 18S, 5.8S and 25S rRNAs repeats are fragile sites that are associated with epigenetic alterations and DNA damage Family Members: There are no noted family members available for this transgene. Other Related Loci: Contained in NOR References: (chromatin) Yue, MX et al. 2021. Physiol Plant pp.doi: 10.1111/ppl.13438 Histone acetylation of 45S rDNA correlates with disrupted nucleolar organization during heat stress response in Zea mays L rDNA5.8S 5.8S ribosomal RNA See the complete record for rDNA5.8S 5.8S ribosomal RNA. Notes: NOR (nucleolus organizer) component Family Members: There are no noted family members available for this transgene. Other Related Loci: Contained in ITS1 rDNA5.8S ITS2 References: (Genelist) Jupe, ER and Zimmer, E. 1990. Plant Mol Biol 14:333-347 Unmethylated regions in the intergenic spacer of maize and teosinte ribosomal RNA genes (Probe) Buckler, Edward and Holtsford, TP. 1996. Mol Biol Evol 13:612-622 Zea systematics: Ribosomal ITS evidence (Probe) Riera-Lizarazu, O et al. 1996. Theor Appl Genet 93:123-135 Cytological and molecular characterization of oat x maize partial hybrids rfC restorer of fertility for cms-C See the complete record for rfC restorer of fertility for cms-C. Notes: General name for dominant restorer of fertility for C-type cytoplasmic male sterility. Could be Rf4 (an allele of ms23), Rf5, and/or Rf6. Family Members: rf5 restorer of fertility5 ms23 male sterile23 rf6 restorer of fertility6 Other Related Loci: There are no noted related loci available for this transgene. References: There are no noted references available for this transgene. rfS restorer of fertility for cms-S See the complete record for rfS restorer of fertility for cms-S. Notes: General name for dominant restorer of fertility for S-type cytoplasmic male sterility. Could be Rf3, Rf9, etc.. Family Members: rf3 restorer of fertility3 rf9 restorer of fertility9 Other Related Loci: There are no noted related loci available for this transgene. References: There are no noted references available for this transgene. sigma factor sigma factor of plastid RNA polymerase See the complete record for sigma factor sigma factor of plastid RNA polymerase. Notes: Plastid sigma factor is possibly a multigene family. includes sig1,sig2. Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: There are no noted references available for this transgene. snr5 small nucleolar RNA U5 See the complete record for snr5 small nucleolar RNA U5. Notes: identity based on homology to Arabidopsis clones; genomic clones have distinct 5'-sequence After transfection into maize leaf protoplasts, MzU5.1 and MzU5.2 express clearly, and MzU5.3 expresses at very low levels. Clones MzU5.3, MzU5.2, MzU5.1. Z14994 and Z14995 BLAST to the short arm ends of chr1 and chr2 at multiple tandem sites USE promoter element (highly conserved, plant-specific) placed with respect to the -30 TATA box, corresponds to Pol III and Pol II specificity, must also have MSP element (Monocot-Specific Promoter), consensus RGCCR, in 1-3 copies Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (gene expression) Leader, D et al. 1993. Plant Mol Biol 21:133-143 Differential expression of U5snRNA gene variants in maize (Zea mays) protoplasts) (Genelist) Leader, D et al. 1993. Plant Mol Biol 21:133-143 Differential expression of U5snRNA gene variants in maize (Zea mays) protoplasts) (promoter analysis) Connelly, S; Marshallsay, C; Leader, D; Brown, JWS; Filipowicz, W. 1994. Mol Cell Biol 14:5910-5919 Small nuclear RNA genes transcribed by either RNA polymerase II or RNA polymerase III in monocot plants share three promoter elements and use a strategy to regulate gene expression different from that used by their dicot plant counterparts (regulation) Connelly, S; Marshallsay, C; Leader, D; Brown, JWS; Filipowicz, W. 1994. Mol Cell Biol 14:5910-5919 Small nuclear RNA genes transcribed by either RNA polymerase II or RNA polymerase III in monocot plants share three promoter elements and use a strategy to regulate gene expression different from that used by their dicot plant counterparts spr signal recognition particle RNA See the complete record for spr signal recognition particle RNA. Notes: GenBank X14661 BLASTs to an intergenic region in chr9 between fat2 and Zm00001eb377370 (NCBI 107181290) gene family Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Campos, N et al. 1989. Nucl Acid Res 17:1573-1588 Diversity of 7 SL RNA from the signal recognition particle of maize endosperm ubf9*-X92422 See the complete record for ubf9*-X92422 . Notes: There are no notes available for this transgene. Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (gene product) Callis, J; Bedinger, P. 1994. Proc Natl Acad Sci, USA 91:6074-6077 Developmentally regulated loss of ubiquitin and ubiquitinated proteins during pollen maturation in maize (gene product) Worrall, D; Twell, D. 1994. Bioessays 16:873-875 Pollen maturation: where ubiquitin is not required? (cDNA sequence) Chevalier, C et al. 1996. Plant Sci 117:95-105 Sugar levels regulate the expression of ribosomal protein genes encoding protein S28 and ubiquitin-fused protein S27a in maize primary root tips zp zein polypeptide See the complete record for zp zein polypeptide. Notes: designator for genes encoding zein Family Members: There are no noted family members available for this transgene. Other Related Loci: There are no noted related loci available for this transgene. References: (Genelist) Soave, C et al. 1978. Theor Appl Genet 52:263-267 Linkage relationships between regulatory and structural gene loci involved in zein synthesis in maize (Genelist) Soave, C et al. 1981. Genetics 97:363-377 Clustering of genes for 20 kd zein subunits in the short arm of maize chromosome 7 (gene product) Lending, CR and Larkins, BA. 1992. Protoplasma 171:123-133 Effect of the floury-2 locus on protein body formation during maize endosperm development (gene product) Balconi, C et al. 1993. Plant J 3:325-334 The accumulation of zein polypeptides and zein messenger RNA in cultured endosperms of maize is modulated by nitrogen supply (gene product) Feix, G and Quayle, TJA. 1993. Crit Rev Plant Sci 12:111-127 Structure and expression of zein genes of maize (gene product) Damerval, C and de Vienne, D. 1993. Heredity 70:38-51 Quantification of dominance for proteins pleiotropically affected by opaque-2 in maize (gene product) Dombrink-Kurtzman, MA and Bietz, JA. 1993. Cereal Chem 70:105-108 Zein composition in hard and soft endosperm of maize (gene product) Liu, C-N and Rubenstein, I. 1992. Mol Gen Genet 234:244-253 Molecular characterization of 2 types of 22 kilodalton alpha-zein genes in a gene cluster in maize (transgenic expression) Larkins, BA et al. 1993. Am J Clin Nutr 58:S264-S269 Modification of maize-seed-protein quality (transgenic expression) Matzke, AJM et al. 1993. Plant Mol Biol 22:553-554 A zein gene promoter fragment drives gus expression in a cell layer that is interposed between the endosperm and the seed coat (gene product) Paulis, J et al. 1992. Theor Appl Genet 85:407-414 Expression of A/B zeins in single and double maize endosperm mutants (gene product) Habben, J et al. 1992. pp.57-64 in Takai, K. 1992. Frontiers and New Horizons in Amino Acid Research; First Biennial International Conference on Amino Acid Characterization of genes that modify maize seed proteins and enhance the amino acid quality of the grain (gene product) Li, X and Liu, J. 1993. Acta Agron Sin 19:218-226 The effects of maize endosperm mutant genes and gene interactions on kernel components. I. The effects on kernel weight protein content and protein fractions (Variation) Marks, MD and Larkins, BA. 1982. J Biol Chem 257:9976-9983 Analysis of sequence microheterogeneity among zein messenger RNAs (Variation) Heidecker, G and Messing, J. 1983. Nucl Acid Res 11:4891-4906 Sequence analysis of zein cDNAs obtained by an efficient mRNA cloning method (gene product) Unger, E; Parsons, RL; Schmidt, RJ; Bowen, B; Roth, BA. 1993. Plant Cell 5:831-841 Dominant negative mutants of opaque2 suppress transactivation of a 22-kD zein promoter by opaque2 in maize endosperm cells (gene product) Lur, H and Setter, TL. 1993. Plant Physiol 103:273-280 Role of auxin in maize endosperm development - timing of nuclear DNA endoreduplication, zein expression, and cytokinin (gene product) Bogyo, TP et al. 1993. Theor Appl Genet 87:33-37 Quantitative genetic studies of A/B zeins using a new model to test non-allelic interactions (gene product) Lopes, MA and Larkins, BA. 1993. Plant Cell 5:1383-1399 Endosperm origin, development, and function (gene product) Matsumura, Y; Andonova, PP; Hayashi, Y; Murakami, H; Mori, T. 1994. Cereal Chem 71:428-433 Antioxidant activities of zeins from different maize varieties against docosahexaenoic acid ethyl ester (gene product) Boyer, CD; Hannah, LC pp.1-28 in Hallauer, AR. 1994.CRC Press Kernel mutants of corn (gene product) Schmidt, RJ pp.337-350 in Verma, DPS. 1993.CRC Press Opaque-2 and zein gene expression (gene product) Lopes, MA; Coleman, CE; Kodrzycki, R; Lending, CR; Larkins, BA. 1994. Mol Gen Genet 245:537-547 Synthesis of an unusual alpha-zein protein is correlated with the phenotypic effects of the floury2 mutation in maize (gene product) Paulis, J; Bietz, J pp.135-161 in Kruger, JE and Bietz, JA. 1994.High-Performance Liquid Chromatography of Cereal and Legume Proteins Maize (gene product) Richard, G et al. 1996. Plant Physiol Biochem 34:237-243 Transport and deposition of cereal prolamins (gene product) Okita, T and Rogers, JC. 1996. Annu Rev Plant Physiol Plant Mol Biol 47:327-350 Compartmentation of proteins in the endomembrane system of plant cells (gene product) Plotnikov, VK and Bakaldina, NB. 1996. Plant Mol Biol 31:507-515 Differential stability of zein mRNA in developing corn kernel (gene product) Beck, MI et al. 1996. International Journal of Pharmaceutics 141:137-150 Physico-chemical characterization of zein as a film coating polymer - A direct comparison with ethyl cellulose (Variation) Viotti, A et al. 1985. EMBO J 4:1103-1110 Each zein gene class can produce polypeptides of different sizes (gene expression) Woo, Y et al. 2001. Plant Cell 13:2297-2317 Genomics analysis of genes expressed in maize endosperm identifies novel seed proteins and clarifies patterns of zein gene expression zp19/22 19/22-kDa zein protein gene family See the complete record for zp19/22 19/22-kDa zein protein gene family. Notes: the major zein gene family, includes subfamilies A20, A30, B49, B59,SF4; also characterized as containing two molecular weight subfamilies 19 kDa and 22 kDa.expression of the SF4 zein genes is under transcriptional control of the opaque2(O2) transciptional activator Family Members: There are no noted family members available for this transgene. Other Related Loci: Regulated By o2 References: (Genelist) Burr, B et al. 1982. J Mol Biol 154:33-49 Zein storage protein gene family of maize (Variation) Marks, MD. 1985. J Biol Chem 260:16451-16459 (gene product) Balconi, C et al. 1993. Plant J 3:325-334 The accumulation of zein polypeptides and zein messenger RNA in cultured endosperms of maize is modulated by nitrogen supply (evolution) Ottoboni, LMM et al. 1993. Plant Mol Biol 21:765-778 Sequence analysis of 22 kDa-like alpha-coixin genes and their comparison with homologous zein and kafirin genes reveals highly conserved protein structure and regulatory elements (homeolog) Ottoboni, LMM et al. 1993. Plant Mol Biol 21:765-778 Sequence analysis of 22 kDa-like alpha-coixin genes and their comparison with homologous zein and kafirin genes reveals highly conserved protein structure and regulatory elements (gene product) Dombrink-Kurtzman, MA and Bietz, JA. 1993. Cereal Chem 70:105-108 Zein composition in hard and soft endosperm of maize (Variation) Schmidt, RJ et al. 1992. Plant Cell 4:689-700 Opaque-2 is a transcriptional activator that recognizes a specific target site in 22-kD-zein genes (Variation) Pedersen, K. 1982. Cell 29:1015-1026 Cloning and sequence analysis reveal structural variation among related zein genes in maize (gene product) Marks, MD and Larkins, BA. 1982. J Biol Chem 257:9976-9983 Analysis of sequence microheterogeneity among zein messenger RNAs (Variation) Heidecker, G et al. 1991. Genomics 10:719-732 Highly clustered zein gene sequences reveal evolutionary history of the multigen family (gene product) Hagen, G and Rubenstein, I. 1981. . Plant Sci 19:217-223 (gene product) Righetti, PG. 1977. Planta 136:115-123 (Variation) Geraghty, DE et al. 1982. EMBO J 1:1329-1335 Sequence analysis and comparison of cDNAs of the zein multigene family (Variation) Hu, NT. 1982. EMBO J 1:1337-1342 Primary structure of a genomic zein sequence of maize (Variation) Roussell, DL et al. 1988. Mol Gen Genet 211:202-209 Deletion of DNA sequences flanking an Mr 19000 zein gene reduces its transcriptional activity in heterologous plant tissues (Variation) Kriz, AL et al. 1987. Mol Gen Genet 207:90-98 Structural and transcriptional analysis of DNA sequences flanking genes that encode 19 kilodalton zeins (gene expression) Or, E; Boyer, SK; Larkins, BA. 1993. Plant Cell 5:1599-1609 opaque2 modifiers act post-transcriptionally and in a polar manner on gamma-zein gene expression in maize endosperm (codon usage) Fennoy, SL and Bailey-Serres, J. 1993. Nucl Acid Res 21:5294-5300 Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C-ending and G-ending codons (gene product) Lopes, MA; Coleman, CE; Kodrzycki, R; Lending, CR; Larkins, BA. 1994. Mol Gen Genet 245:537-547 Synthesis of an unusual alpha-zein protein is correlated with the phenotypic effects of the floury2 mutation in maize (gene product) Muller, M; Muth, JR; Gallusci, P; Knudsen, S; Maddaloni, M; Motto, M; Schmitz, D; Sorensen, MB; Sala. 1995. J Plant Physiol 145:606-613 Regulation of storage protein synthesis in cereal seeds: developmental and nutritional aspects (transgenic expression) Coleman, C; Herman, E; Takasaki; K; Larkins, B. 1996. Maize Genetics Conference Abstracts 38 Expression of alpha- and gamma-zein genes in tobacco endosperm (gene expression) Duke, ER and Doehlert, DC. 1996. Environ Exp Bot 36:199-208 Effects of heat stress on enzyme activities and transcript levels in developing maize kernels grown in culture (stability) Smetanin, D et al. 2000. Changes in zein mRNA stability during maize kernel development. Fiziol Rast 47:485-491 Changes in zein mRNA stability during maize kernel development (gene expression) Sturaro, M and Viotti, A. 2001. Methylation of the Opaque2 box in zein genes is parent-dependent and affects O2 DNA binding activity in vitro. Plant Mol Biol 46:549-560 Methylation of the Opaque2 box in zein genes is parent-dependent and affects O2 DNA binding activity in vitro (gene expression) Woo, Y et al. 2001. Plant Cell 13:2297-2317 Genomics analysis of genes expressed in maize endosperm identifies novel seed proteins and clarifies patterns of zein gene expression |
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