Assembly Name |
Identifier |
Line
| BioProject |
Quality |
Toronto Agreement
|
Release |
Status |
Ab-Traiperm_572-DRAFT-PanAnd-1.0
|
Ab00001a
|
Traiperm572
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Ac-Pasquet1232-DRAFT-PanAnd-1.0
|
Ac00001a
|
Pasquet1232
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Ag-CAM1351-DRAFT-PanAnd-1.0
|
Ag00001a
|
CAM1351
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Av-Kellogg1287_8-REFERENCE-PanAnd-1.0
|
Av00001a
|
Kellogg1287
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
B73 RefGen_v1
|
Zm00001a
|
B73
|
PRJNA10769
|
Representative
|
no
|
2009
|
Completed
|
|
B73 RefGen_v2
|
Zm00001b
|
B73
|
PRJNA10769
|
Representative
|
no
|
2010
|
Completed
|
|
B73 RefGen_v3
|
Zm00001c
|
B73
|
PRJNA72137
|
Representative
|
no
|
2013
|
Completed
|
|
BAC-based maize B73
|
|
B73
|
N/A
|
|
n/a
|
2008
|
|
|
Bl-K1279B-DRAFT-PanAnd-1.0
|
Bl00001a
|
Kellogg1279-B
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Cc-PI314907-DRAFT-PanAnd-1.0
|
Cc00001a
|
PI314907
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Cr-AUB069-DRAFT-PanAnd-1.0
|
Cr00001a
|
AUB69
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Cs-KelloggPI219580-DRAFT-PanAnd-1.0
|
Cs00001a
|
KelloggPI219580
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Et-Layton_Zhong168-DRAFT-PanAnd-1.0
|
Et00001a
|
Layton&Zhong168
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Hc-AUB53_1-DRAFT-PanAnd-1.0
|
Hc00001a
|
AUB53
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Hp-KelloggPI404118-DRAFT-PanAnd-1.0
|
Hp00001a
|
KelloggPI404118
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Ir-Pasquet1136-DRAFT-PanAnd-1.0
|
Ir00001a
|
Pasquet1136
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Pi-Clark-DRAFT-PanAnd-1.0
|
Pi00001a
|
Clark_sn
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Pp-Kellogg1297-DRAFT-PanAnd-1.0
|
Pp00001a
|
Kellogg1297
|
PRJEB51672
|
|
YES
|
|
Completed and released November 1, 2022 in round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Rr-Malcomber3106-DRAFT-PanAnd-1.0
|
Rr00001a
|
Malcomber3106
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Rt-Layton_Zhong169-DRAFT-PanAnd-1.0
|
Rt00001a
|
Layton&Zhong169
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Sm-PI203595-DRAFT-PanAnd-1.0
|
Sm00001a
|
PI203595
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Sn-CAM1369-DRAFT-PanAnd-1.0
|
Sn00001a
|
CAM1369
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Ss-CAM1384-DRAFT-PanAnd-1.0
|
Ss00002a
|
CAM1384
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Td-FL_9056069_6-DRAFT-PanAnd-1.0
|
Td00001a
|
FL_9056069_6
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Td-FL_9056069_6-REFERENCE-PanAnd-2.0
|
Td000001b
|
FL_9056069_6
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Td-KS_B6_1-DRAFT-PanAnd-1.0
|
Td00002a
|
KS_B6_1
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Td-McKain334_5-DRAFT-PanAnd-1.0
|
Td00003a
|
McKain334-5
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Te-Pasquet1246-DRAFT-PanAnd-1.0
|
Te00001a
|
Pasquet1246
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Tt-AUB21_1-DRAFT-PanAnd-1.0
|
Tt00001a
|
AUB21-1
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Tz-DC_05_58_3A-DRAFT-PanAnd-1.0
|
Tz00001a
|
DC_05_58_3A
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Ud-Pasquet1171-DRAFT-PanAnd-1.0
|
Ud00001a
|
Pasquet1171
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Vc-Pasquet1098-DRAFT-PanAnd-1.0
|
Vc00001a
|
Pasquet1098
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zd-Gigi-REFERENCE-PanAnd-1.0
|
Zd00001a
|
Gigi
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zd-Momo-REFERENCE-PanAnd-1.0
|
Zd00003a
|
Momo
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zh-RIMHU001-REFERENCE-PanAnd-1.0
|
Zh00001a
|
RIMHU001
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zl-RIL003-REFERENCE-PanAnd-1.0
|
|
RIL003
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zm-A188-REFERENCE-KSU-1.0
|
Zm00056a
|
A188
|
PRJNA543394
|
|
n/a
|
|
|
|
Zm-A632-REFERENCE-CAAS_FIL-1.0
|
Zm00092a
|
A632
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-B104-DRAFT-ISU_USDA-0.1
|
Zm00007a
|
B104
|
|
Draft
|
YES
|
fall 2017
|
Draft pseudomolecules. Full reference genome release expected fall 2017.
|
|
Zm-B73_AB10-REFERENCE-NAM-1.0
|
Zm00043a
|
B73Ab10
|
PRJEB35367
|
|
n/a
|
|
|
|
Zm-B73_B_CHROMOSOME-MBSC-1.0
|
Zm00044a
|
B73 + B chromosome(s)
|
PRJNA633287
|
|
n/a
|
|
|
|
Zm-B73-REFERENCE-GRAMENE-4.0
|
Zm00001d
|
B73
|
PRJNA72137
|
Representative
|
no
|
9/16/2016
|
Assembly and annotation released in spring, 2017
|
|
Zm-B73-REFERENCE-NAM-5.0
|
Zm00001e
|
B73
|
PRJEB32225
|
|
n/a
|
|
|
|
Zm-B97-REFERENCE-NAM-1.0
|
Zm00018a
|
B97
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Chang-7_2-REFERENCE-CAAS_FIL-1.0
|
Zm00093a
|
Chang7-2
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-CIMBL55-CAU-1.0
|
Zm00067a
|
CIMBL55
|
PRJNA765111
|
|
n/a
|
|
|
|
Zm-CIMBL55-CAU-2.0
|
Zm00067a
|
CIMBL55
|
PRJNA765111
|
|
n/a
|
|
|
|
Zm-CML103-REFERENCE-NAM-1.0
|
Zm00021a
|
CML103
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-CML228-REFERENCE-NAM-1.0
|
Zm00022a
|
CML228
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-CML247-DRAFT-PANZEA-1.0
|
Zm00006a
|
CML247
|
|
Draft
|
no
|
5/30/2016
|
Assembly and annotation released
|
|
Zm-CML247-REFERENCE-NAM-1.0
|
Zm00023a
|
CML247
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-CML247-REFERENCE-PANZEA-1.1
|
Zm00006b
|
CML247
|
PRJNA396542
|
Reference
|
no
|
10/24/2017
|
Assembly released, annotation in progress
|
|
Zm-CML277-REFERENCE-NAM-1.0
|
Zm00024a
|
CML277
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-CML322-REFERENCE-NAM-1.0
|
Zm00025a
|
CML322
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-CML333-REFERENCE-NAM-1.0
|
Zm00026a
|
CML333
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-CML52-REFERENCE-NAM-1.0
|
Zm00019a
|
CML52
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-CML69-REFERENCE-NAM-1.0
|
Zm00020a
|
CML69
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Dan340-REFERENCE-BAAFS-1.0
|
Zm00104a
|
Dan340
|
PRJNA795201
|
|
n/a
|
2022
|
|
|
Zm-Dan340-REFERENCE-CAAS_FIL-1.0
|
Zm00094a
|
Dan340
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-DK105-REFERENCE-TUM-1.0
|
Zm00016a
|
DK105
|
PRJNA360923
|
Reference
|
n/a
|
2018-10-01
|
|
|
Zm-EP1-REFERENCE-TUM-1.0
|
Zm00010a
|
EP1
|
PRJNA360920
|
Reference
|
no
|
1st of February 2017 (pre-release)
|
Assembly and annotation released
|
|
Zm-F7-REFERENCE-TUM-1.0
|
Zm00011a
|
F7
|
PRJNA360923
|
Reference
|
no
|
1st of February 2017 (pre-release)
|
Assembly and annotation released
|
|
Zm-HP301-REFERENCE-NAM-1.0
|
Zm00027a
|
HP301
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Huangzaosi-REFERENCE-CAAS_FIL-1.0
|
Zm00095a
|
Huangzaosi
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-Ia453-REFERENCE-FL-1.0
|
Zm00045a
|
Ia453-sh2
|
PRJNA646414
|
|
n/a
|
2020-12-01
|
|
|
Zm-Il14H-REFERENCE-NAM-1.0
|
Zm00028a
|
Il14H
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Jing724-REFERENCE-CAAS_FIL-1.0
|
Zm00096a
|
Jing724
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-Jing92-REFERENCE-CAAS_FIL-1.0
|
Zm00097a
|
Jing92
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-K0326Y-REFERENCE-SIPPE-1.0
|
Zm00054a-LCS
|
K0326Y
|
PRJNA539996
|
|
n/a
|
2019-10-22
|
|
|
Zm-Ki11-REFERENCE-NAM-1.0
|
Zm00030a
|
Ki11
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Ki3-REFERENCE-NAM-1.0
|
Zm00029a
|
Ki3
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Ky21-REFERENCE-NAM-1.0
|
Zm00031a
|
Ky21
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-LH244-REFERENCE-BAYER-1.0
|
Zm00052a
|
LH244
|
PRJEB40019
|
|
YES
|
|
|
|
Zm-M162W-REFERENCE-NAM-1.0
|
Zm00033a
|
M162W
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-M37W-REFERENCE-NAM-1.0
|
Zm00032a
|
M37W
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Mo17-REFERENCE-CAU-1.0
|
Zm00014a
|
Mo17-2021
|
PRJNA358298
|
Reference
|
no
|
full release 2018
|
Assembly and annotation completed.
|
|
Zm-Mo17-REFERENCE-CAU-2.0
|
Zm00014ba
|
Mo17-2021
|
PRJNA751841
|
|
n/a
|
|
|
|
Zm-Mo17-REFERENCE-CAU-2.0
|
Zm00014ba
|
Mo17-2021
|
PRJNA751841
|
|
n/a
|
|
|
|
Zm-Mo17-REFERENCE-YAN-1.0
|
Zm00009a
|
Mo17
|
PRJNA299869
|
Reference
|
no
|
Nov, 2017
|
Assembly and annotation completed
|
|
Zm-Mo18W-REFERENCE-NAM-1.0
|
Zm00034a
|
Mo18W
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Ms71-REFERENCE-NAM-1.0
|
Zm00035a
|
Ms71
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-NC350-REFERENCE-NAM-1.0
|
Zm00036a
|
NC350
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-NC358-REFERENCE-NAM-1.0
|
Zm00037a
|
NC358
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Oh43-REFERENCE-CAAS_FIL-1.0
|
Zm00098a
|
OH43
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-Oh43-REFERENCE-NAM-1.0
|
Zm00039a
|
Oh43
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Oh7B-REFERENCE-NAM-1.0
|
Zm00038a
|
Oh7B
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-P39-REFERENCE-NAM-1.0
|
Zm00040a
|
P39
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-PE0075-REFERENCE-TUM-1.0
|
Zm00017a
|
PE0075
|
PRJNA360923
|
Reference
|
n/a
|
2018-10-01
|
|
|
Zm-PH207-REFERENCE-CAAS_FIL-1.0
|
Zm00099a
|
PH207
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-PH207-REFERENCE_NS-UIUC_UMN-1.0
|
Zm00008a
|
PH207
|
PRJNA389728
|
Reference
|
no
|
Nov, 2016
|
Assembly and annotation completed
|
|
Zm-S37-REFERENCE-CAAS_FIL-1.0
|
Zm00100a
|
S37
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-SK-REFERENCE-YAN-1.0
|
Zm00015a
|
tropical landrace
|
PRJNA531547
|
|
n/a
|
|
|
|
Zm-Tx303-REFERENCE-NAM-1.0
|
Zm00041a
|
Tx303
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-Tzi8-REFERENCE-NAM-1.0
|
Zm00042a
|
Tzi8
|
PRJEB31061
|
|
n/a
|
|
|
|
Zm-W22-REFERENCE-NRGENE-2.0
|
Zm00004b
|
W22
|
PRJNA311133
|
Reference
|
no
|
December, 2016
|
Assembly and annotation completed
|
|
Zm-Xu178-REFERENCE-CAAS_FIL-1.0
|
Zm00101a
|
Xu178
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-Ye478-REFERENCE-CAAS_FIL-1.0
|
Zm00102a
|
Ye478
|
PRJNA755430
|
|
n/a
|
|
|
|
Zm-Zheng58-REFERENCE-CAAS_FIL-1.0
|
Zm00103a
|
Zheng58
|
PRJNA755430
|
|
n/a
|
|
|
|
Zn-PI615697-REFERENCE-PanAnd-1.0
|
Zn00001a
|
PI615697
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zv-Ames21814-REFERENCE-CEMPS-1.0
|
Zv00003a
|
Ames 21814
|
PRJCA011706(NGDC)
|
|
YES
|
|
|
|
Zv-TIL01-REFERENCE-PanAnd-1.0
|
Zv00001a
|
TIL01
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zv-TIL11-REFERENCE-PanAnd-1.0
|
Zv00002a
|
TIL11
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zx-PI566673-REFERENCE-YAN-1.0
|
Zx00001a
|
PI 566673
|
PRJNA299874
|
Reference
|
no
|
Nov, 2017
|
Assembly and annotation completed
|
|
Zx-TIL18-REFERENCE-PanAnd-1.0
|
Zx00002a
|
TIL18
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|
Zx-TIL25-REFERENCE-PanAnd-1.0
|
Zx00003a
|
TIL25
|
PRJEB50280
|
|
YES
|
|
Completed and released November 1, 2022 as round 1 of the Pan-Andropogoneae project under the Toronto agreement.
|
|