SSR Reports

Complete List of SSR Repeats Select for tab delimited text file

(AAAAAC)4
(AAAAC)4
(AAAAG)4
(AAAAG)5
AAAAT
(AAAAT)4
(AAAAT)4
AAAC
AAAC
AAAG
AAAG
AAAG
AAAG
(AAAG)4
(AAAG)6
(AAAT)4
(AAAT)4
(AAAT)4
(AAAT)5
AAC
AAC
(AAC)4
(AAC)4
(AAC)4
(AAC)5
(AAC)5
(AAC)5
(AAC)6
(AAC)7
AACA
(AACA)4
(AACA)6
(AACC)5
AACG
AACGC
AAG
AAG
AAG
AAG
AAG
AAG
AAG
(AAG)4
(AAG)4
(AAG)4
(AAG)4
(AAG)4
(AAG)4
(AAG)5
(AAG)5
(AAG)5
(AAG)5
(AAG)5
(AAG)5
(AAG)6
(AAG)6
(AAGA)4
(AAGAA)4
AAGC
AAGC
AAGC
AAGCG
(AAGGAG)4
(AAGGAG)5
AAT
AAT
(AAT)4
(AAT)4
AAT (41)
(AAT)6
(AAT)7
(AATA)5
AC
AC
AC
AC
AC
AC
AC
AC
AC
AC
AC
AC
AC
AC
AC
(AC)10
(AC)15
(AC)16
(AC)17
(AC)20
(AC)20
(AC)22
(AC)26
(AC)4 G (CA)6 T (CA)3 TA (CA
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)6
(AC)7
(AC)7
(AC)7
(AC)7
(AC)7
(AC)7
(AC)8
(AC)8
(AC)8
(AC)8
(AC)8
(AC)8
(AC)8
(AC)8
(AC)8
(AC)8
(ACA)17
(ACA)4
(ACA)6
(ACA)6
(ACAA)4
(ACAC)4
ACACA
(ACACA)4
(ACACAC)4
(ACAG)4
(ACAT)4
(ACAT)4
ACC
ACC
ACC
ACC
ACC
ACC
ACC
ACC
ACC
ACC
ACC
(ACC)4
(ACC)4
(ACC)4
(ACC)4
(ACC)4
(ACC)4
(ACC)5
(ACC)5
(ACC)5
(ACC)6
(ACCA)4
(ACCAG)4
ACCG
ACCT
ACG
ACG
ACG
ACG
(ACG)4
(ACG)4
(ACG)4
(ACG)4
(ACG)4
(ACG)5
(ACG)5
(ACG)6
(ACG)7
ACGC
ACGG
(ACGT)4
ACT
ACT
ACT
(ACT)4
(ACT)4
(ACT)5
ACTG/ACG***
(ACTGC)4
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
AG
(AG)10
(AG)10
(AG)10
(AG)10
(AG)10
(AG)10
(AG)10
AG(10)
AG(10)
AG(10)
AG(10)
AG(11)
AG(11)
AG(11)
AG(11)
AG(11)
(AG)12
(AG)12
(AG)12
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(12)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(13)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
AG(14)
(AG)15
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
AG(15)
(AG)16
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(16)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(17)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(18)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
AG(19)
(AG)20
(AG)20
(AG)20
(AG)20
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG(20)
AG (21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(21)
AG(22)
AG(22)
AG(22)
AG(22)
AG(22)
AG(22)
AG(22)
AG(22)
AG(22)
AG(22)
AG(22)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
AG(23)
(AG)24
(AG)24
AG(24)
AG(24)
AG(24)
AG(24)
AG(24)
AG(24)
AG(24)
AG(24)
AG(24)
AG(24)
AG(24)
(AG)25
AG(25)
AG(25)
AG(25)
AG(25)
AG(25)
AG(25)
AG(25)
AG(25)
AG(25)
AG(26)
AG(26)
AG(26)
AG(26)
AG(26)
AG(26)
AG(26)
AG(26)
AG(27)
AG(27)
AG(27)
AG(27)
AG(27)
AG(27)
AG(27)
AG(27)
AG(27)
AG(27)
(AG)28
(AG)28
AG(28)
AG(28)
AG(28)
AG(28)
AG(28)
AG(29)
AG(29)
AG(29)
AG(30)
AG(30)
AG(30)
AG(30)
AG(30)
AG(30)
AG(30)
AG(30)
AG(31)
AG(31)
AG(31)
AG(31)
(AG)32
AG(32)
AG(32)
AG(32)
AG(32)
AG (33)
AG(33)
AG(33)
AG(33)
AG(33)
AG(33)
AG(33)
AG(33)
AG(33)
AG(34)
AG(34)
AG(34)
AG(34)
AG(34)
AG(35)
AG(35)
AG(36)
AG(37)
AG(37)
AG(37)
AG(38)
AG(39)
AG(39)
(AG)40
AG(41)
AG(41)
AG(42)
AG(42)
AG(43)
(AG)44
AG (53)
(AG)6
(AG)6
(AG)6
(AG)6
(AG)6
(AG)6
(AG)6
(AG)6
(AG)6
(AG)6
(AG)6
(AG)7
(AG)7
(AG)7
(AG)7
(AG)7
(AG)7
(AG)7
(AG)7
(AG)7
(AG)7
(AG)7
(AG)8
(AG)8
(AG)8
(AG)8
(AG)8
(AG)8
(AG)8
(AG)8
(AG)8
(AG)8
(AG)8
(AG)9
AG (9)
(AGA)4
(AGA)4
(AGA)4
(AGA)4
(AGA)5
(AGA)5
(AGA)6
(AGA)7
(AGAA)6
(AGAAAGAA)4
(AGAAT)4
AGAC
(AGAG)4
(AGAGAGAGAGAGAG)4
AG/AGCG***
(AGAGG)4
AGAT
AGAT
AGATG
AGATG
(AGATG)4
AGC
AGC
AGC
AGC
AGC
AGC
AGC
AGC
AGC
AGC
AGC
AGC
AGC
(AGC)4
(AGC)4
(AGC)4
(AGC)4
(AGC)4
(AGC)4
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)5
(AGC)6
(AGC)6
(AGC)7
(AGC)7
(AGCA)4
(AGCA)5
(AGCAG)4
AGCC
AGCC
(AGCC)4
(AGCC)4
(AGCC)4
(AGCCAG)4
(AGCG)4
(AGCG)4
AGCGGG
AGCT
AGCT
AGCT
AGCT
(AGCT)4
(AGCT)4
(AGCT)4
AGCTG
AGG
AGG
AGG
AGG
AGG
(AGG)4
(AGG)4
(AGG)4
(AGG)4
(AGG)4
(AGG)4
(AGG)6
(AGG)8
AGGAA
AGG/AAG***
(AGGAC)4
(AGGAC)4
AGGAG
(AGGAGA)4
AGGC
AGGCG
AGGTG
(AGT)4
(AGT)4
(AGT)4
(AGT)4
(AGT)4
(AGT)4
(AGT)4
(AGT)4
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
AT
(AT)10
(AT)10
AT (10)
(AT)11
(AT)16
AT (20)
AT21
(AT)32
AT36
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)6
(AT)7
(AT)7
(AT)7
(AT)7
AT7
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
(AT)8
AT8
(AT)8N20AT4GT8
(ATA)6
(ATA)6
(ATA)6
(ATAATAATAATAATA)4
ATAC
ATAC
ATAC
ATAC
(ATAC)4
(ATAC)7
(ATAG)6
(ATAT)4
AT/ATAC***
ATATC
ATC
(ATC)4
(ATC)5
(ATC)5
(ATC)5
(ATC)5
(ATC)6
ATCC
ATCC
(ATCC)5
ATCG
(ATG)4
(ATG)4
(ATG)4
(ATG)4
(ATG)5
(ATG)6
(ATG)6
(ATG)8
ATGC
(ATGC)5
(ATGCA)4
(ATGG)4
(ATGG)4
(ATGG)4
(ATGG)4
(ATGGG)4
(ATGT)4
(ATGT)5
(ATGT)8
ATT
ATT
(ATT)4
(ATT)4
(ATT)4
(ATTGC)5
(ATTTA)6
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
CA
(CA)10
(CA)10
(CA)10
(CA)12
(CA)12
CA12
(CA)14
(CA)15
(CA)15(CGCA)12
(CA)16
(CA)16(TA)6(CA)2
(CA)17(TA)5
(CA)19
(CA)23
(CA)25
(CA)2(GA)26
(CA)30
CA(31)
(CA)32
(CA)6
(CA)6
(CA)6
(CA)6 (A)5 (CA)9
(CA)6(CT)2(CA)6
(CA)7
(CA)7
(CA)7
(CA)7
(CA)8
(CA)8
(CA)8
(CA)8
(CA)8
(CA)8
(CA)8
(CA)8
(CA)8
(CA)8
CA(8)
(CA)9
CAA
CAA
(CAA)16
(CAA)21
(CAA)4
(CAA)4
(CAA)4
(CAA)6
(CAA)6
(CAA)6
(CAA)7
(CAAAA)4
(CAAAA)4
(CAAC)4
CAAG
(CAATC)5
(CAC)4
(CAC)4
(CAC)4
(CAC)4
(CAC)4
(CAC)4
(CAC)4
(CAC)4
(CAC)6
(CACAA)4
CACACG
(CACAG)4
(CACAG)5
(CACGAG)4
CACTT
CAG
CAG
CAG
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)4
(CAG)5
(CAG)5
(CAG)5
(CAG)5
(CAG)5
(CAG)6
(CAG)6
(CAG)6
(CAG)6
(CAG)6
(CAG)8
(CAG)8
(CAG)8
(CAGC)4
(CAGCCT)4
(CAGG)4
(CAGG)4
(CAGGG)7
(CAT)4
(CAT)4
(CAT)4
(CAT)5
(CAT)5
(CAT)5
CATA
(CATC)4
(CATC)4
(CATCT)5
(CATG)5
(CATG)5
(CATTA)4
CCA
CCA
(CCA)39CA)5N14(GA)21N2(GA)5
(CCA)4
(CCA)4
(CCA)4
(CCA)5
(CCA)5
(CCA)5
(CCA)6
(CCA)6
(CCAACA)4
(CCACA)4
CCA; CCATC, TCATC
(CCAT)4
(CCCCA)4
CCCT
CCCTAAA(4)
(CCCTC)4
CCG
CCG
CCG
CCG
CCG
CCG
CCG
CCG
CCG
CCG
CCG
CCG
CCG
CCG
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)4
(CCG)5
(CCG)5
(CCG)5
(CCG)5
(CCG)5
(CCG)5
(CCG)5
(CCG)5
(CCG)5
(CCG)5
(CCG)6
(CCG)6
(CCGC)4
(CCGC)4
(CCGCAG)4
(CCGCCG)4
CCGG
(CCGG)4
(CCGT)4
(CCGT)4
(CCGTGC)4
CCT
CCT
CCT
CCT
(CCT)4
(CCT)4
(CCT)4
(CCT)4
(CCT)4
(CCT)4
(CCT)4
(CCT)5
(CCT)5
(CCT)5
(CCT)5
(CCT)6
(CCT)6
(CCT)6
(CCT)7
(CCT)8
(CCTC)4
(CCTCCT)4
CCTCTC
(CCTG)5
CG
CG
CG
CG
CG
CG
(CG)6
(CG)8
(CG)8
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)4
(CGA)5
(CGA)6
(CGACGC)4
(CGAT)4
(CGAT)5
CGC
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)4
(CGC)5
(CGC)5
(CGC)5
(CGC)5
(CGC)5
(CGC)5
(CGC)5
(CGC)5
(CGC)5
(CGC)5
(CGC)6
(CGC)6
(CGC)6
(CGC)6
(CGC)6
(CGC)6
(CGC)6
(CGC)6
(CGC)7
(CGCC)4
(CGCCGG)4
(CGCG)4
(CGCT)5
(CGCT)5
CGG
CGG
CGG
(CGG)4
(CGG)4
(CGG)4
(CGG)4
(CGG)4
(CGG)4
(CGG)4
(CGG)4
(CGG)4
(CGG)4
(CGG)5
(CGG)5
(CGG)5
(CGG)5
(CGG)5
(CGG)5
(CGG)5
(CGG)5
(CGG)5
(CGG)6
(CGG)6
(CGG)6
(CGG)6
(CGG)6
(CGG)6
(CGG)7
(CGGAGC)4
(CGGC)4
(CGGCG)4
(CGGCG)4
(CGGCGG)4
(CGGG)5
(CGGGG)4
(CGGT)7
(CGT)4
(CGT)4
(CGT)4
(CGT)4
(CGT)4
(CGT)5
(CGT)5
(CGT)5
(CGT)5
(CGT)7
(CGT)7
(CGTC)4
CT
CT
CT
CT
CT
CT
CT
CT
CT
(CT)10
(CT)10
(CT)10
(CT)10
(CT)10
(CT)10
(CT)10TT(CT)8
(CT)11
CT11
(CT)12
(CT)12
(CT)12
(CT)14
(CT)15
(CT)15
(CT)15N2(CT)6
(CT)16
(CT)16
(CT)16
(CT)17
(CT)17
CT (17)
(CT)18
(CT)19
(CT)19
(CT)19
(CT)20
(CT)21
(CT)23
(CT)23
(CT)23
(CT)24
(CT)25
(CT)25
CT(25)
(CT)26
(CT)28
(CT)29
(CT)3 T (CT)6 (CA)16
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6
(CT)6+
(CT)6AT(CT)9
CT6CCT(CT)6ATN(CT)6
(CT)6 + EXTRA STUFF
(CT)7
(CT)7
(CT)7
(CT)7
(CT)7
(CT)7
(CT)7
CT7
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)8
(CT)9
CT9
CT9
(CT)9(CA)8
CT9CA8
(CTA)4
(CTA)5
(CTA)5
CTAG
(CTAG)4
(CTAG)4
(CTAG)4
(CTAG)4
(CTAG)5
(CTAG)5
(CTAGC)4
CTC
(CTC)5
(CTC)5
(CTC)6
(CTCA)4
(CTCA)4
(CTCC)4
(CTCCGG)5
(CTCCGT)4
(CTCCT)4
(CTCG)5
CT COMPLEX
(CTCT)4
(CTCT)4
(CTCT)4
(CTCTA)4
(CTCTCT)4
(CTCTCTCTCT)4
CTG
(CTG)10
(CTG)4
(CTG)4
(CTG)4
(CTG)4
(CTG)4
(CTG)5
(CTG)5
(CTG)6
(CTG)6
(CTG)6
(CTG)8
(CTG)8
(CTGA)4
(CTGC)4
(CTGCA)4
CTGCC
(CTGCCT)4
(CTGGA)4
CTGGCA
(CTGT)4
(CTGT)4
CTT
(CTT)4
(CTT)4
(CTT)4
(CTT)4
(CTT)4
(CTT)4
(CTT)4
(CTT)5
(CTT)5
(CTT)6
(CTT)6
(CTT)7
(CTTC)4
(CTTG)5
(CTTGGC)4
(CTTT)4
(CTTT)5
CTTT (8)
CTTT (8)
CTTT (8)
(CT)X
GA
GA
GA
GA
GA
GA
GA
(GA)10
(GA)10
(GA)10
(GA)10
(GA)10
(GA)10
(GA)10
(GA)10
GA10
(GA)11
(GA)11
(GA)12
(GA)12
(GA)12
(GA)12
(GA)12
GA(12)
(GA)14
(GA)15
(GA)15
GA (15)
(GA)16
(GA)16
(GA)16
(GA)16
(GA)17
(GA)17
GA17
(GA)17N2(GA)23
(GA)18
(GA)18
(GA)19
(GA)21
GA (21)
(GA)23
(GA)23
(GA)23
(GA)24
(GA)24
(GA)25
(GA)26
(GA)27
(GA)28
(GA)28
(GA)29
(GA)29
(GA)29
(GA)2 TA (GA)19
(GA)30
(GA)32
(GA)33
(GA)33
(GA)34
(GA)36
(GA)36
(GA)39
(GA)45
(GA)45N1(GA)14
(GA)4N1(GA)23(GGA)1(GAA)2
(GA)6
(GA)6
(GA)6
(GA)6
(GA)6
(GA)6
(GA)6
(GA)6
(GA)6
(GA)6
(GA)7
(GA)7
(GA)7
GA7
GA7 + COMPLEX
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8
(GA)8N2(GA)52
(GA)9
GA9
(GA)9N2(GA)28
GAA
GAA
GAA
GAA
(GAA)4
(GAA)4
(GAA)5
(GAA)7
(GAAA)24
(GAAA)4
(GAAAA)6(GAA)2
(GAAC)4
(GAAGAG)4
(GAAGG)4
GAC
GAC
GAC
(GAC)10
(GAC)4
(GAC)4
(GAC)4
(GAC)4
(GAC)4
(GAC)4
(GAC)4
(GAC)4
(GAC)4
(GAC)5
(GAC)5
(GAC)5
(GAC)6
(GAC)6
(GACG)6
(GACGG)4
GA COMPLEX
(GACT)4
GAG
(GAG)4
(GAG)4
(GAG)4
(GAG)5
(GAG)5
(GAG)5
(GAG)6
(GAG)6
(GAG)7
GAGA
(GAGA)4
(GAGA)4
(GAGA)5
(GAGCA)4
(GAGCCA)4
(GAGGAG)5
(GAGT)6
GAT
(GAT)4
GATC
GATG
GAT-TAC
GC
GC
GC
GC
GC
(GC)6
(GC)6
(GC)7
(GC)8
GCA
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)4
(GCA)5
(GCA)5
(GCA)5
(GCA)5
(GCA)5
GCA5
(GCA)6
(GCA)6
(GCA)8
GCAA
(GCAA)7
(GCAC)4
(GCACT)5
(GCAT)4
(GCAT)6
GCC
GCC
GCC
GCC
GCC
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)4
(GCC)5
(GCC)5
(GCC)5
(GCC)5
(GCC)5
(GCC)5
(GCC)6
(GCC)6
(GCC)6
(GCC)6
(GCC)7
(GCC)7
(GCC)7
(GCC)7
(GCCAGA)5
(GCCC)4
(GCCG)4
(GCCGCC)4
GCCGCT
(GCCGGT)4
GCCT
(GCCTC)4
(GCCTCT)4
GCG
GCG
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)4
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)5
(GCG)6
(GCG)6
(GCG)6
(GCG)6
(GCG)6
(GCG)6
(GCGACA)4
(GCGACG)4
(GCGACT)4
(GCGCCG)4
(GCGCG)4
GCGCT
(GCGCTG)4
(GCGG)4
(GCGGCG)4
GCT
GCT
GCT
GCT
(GCT)4
(GCT)4
(GCT)4
(GCT)4
(GCT)4
(GCT)4
(GCT)4
(GCT)4
(GCT)4
(GCT)4
(GCT)5
(GCT)5
(GCT)5
(GCT)5
(GCT)5
(GCT)5
(GCT)5
(GCT)5
(GCT)6
(GCT)8
(GCT)8
(GCTA)4
(GCTA)4
(GCTA)5
(GCTA)6
(GCTC)4
GCTCCA
(GCTCCG)4
(GCTGGG)5
GCTT-TA
GGA
GGA
GGA
(GGA)10
(GGA)2(AG)27
GGA3GAG5
(GGA)4
(GGA)4
(GGA)4
(GGA)4
(GGA)5
(GGA)5
(GGA)5
(GGA)5
(GGA)7
(GGA)7
(GGAAG)4
(GGACTG)8
(GGAG)4
(GGAGA)6
GGAT
GGC
GGC
GGC
(GGC)1N3(GGC)5
(GGC)4
(GGC)4
(GGC)4
(GGC)4
(GGC)4
(GGC)4
(GGC)4
(GGC)4
(GGC)4
(GGC)4
(GGC)5
(GGC)5
(GGC)5
(GGC)5
(GGC)6
(GGC)6
(GGC)6
(GGC)6
(GGC)6
(GGC)6
(GGC)7
(GGC)7
(GGC)7
(GGCAT)5
GGCC
(GGCC)4
(GGCCC)5
(GGCCGT)4
(GGCGGT)4
GGCT (6)
(GGCTCT)4
(GGGC)4
GGT
(GGT)10
(GGT)4
(GGT)5
(GGT)6
(GGT)7
GT
GT
(GT)10
(GT)13
(GT)14
(GT)15
(GT)17((GA)8
(GT)28
(GT)2N2(GT)11
(GT)37
(GT)4(GA)6
(GT)6
(GT)6
(GT)6
(GT)6
(GT)7
(GT)7(GA)7
(GT)8
(GT)8
(GT)8
(GT)8
(GT)8
(GT)8
(GT)8
(GT)8
(GT)8
(GT)9(GA)37
GTA
GTA
(GTA)4
GTAC
GTAC
(GTAC)4
(GTAC)4
(GTC)4
(GTC)4
(GTC)4
(GTC)4
(GTC)5
(GTC)5
(GTC)6
(GTC)6
(GTC)7
(GTCC)4
(GTCC)5
GTCT
(GTCTTTG)4
(GTG)4
(GTG)4
(GTG)5
(GTG)5
GTGC
(GTGT)4
(GTGT)4
GTGTC
(GTT)4
(GTT)4
(GTT)5
(GTTC)5
InDel
REALLY LONG CA
TA
TA
TA
TA
TA
TA
TA
TA
TA
TA
TA
TA
TA
TA
TA
(TA)10
(TA)10
(TA)10
TA (10)
(TA)12
(TA)20
(TA)32
(TA)35 (GA)14
(TA)3 (CA)17
(TA)4(CA)2(CG)2N1(GA)32
(TA)4N13(TG)15
(TA)6
(TA)6
(TA)6
(TA)6
(TA)6
(TA)6
(TA)6
(TA)7
(TA)7
(TA)7
(TA)7
TA7
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
(TA)8
TAA
TAA
TAA
(TAA)4
(TAA)4
(TAA)5
(TAA)6
(TAA)6
(TAA)7
(TAA)7
(TAA)8
(TAAA)9
(TAAGC)5
(TAATA)4
TAC
(TAC)4
(TAC)4
(TAC)4
(TAC)4
(TAC)4
(TAC)5
(TACG)4
(TACGA)5
TAG
(TAG)4
(TAG)4
(TAGC)4
(TAT)4
(TAT)5
(TATA)4
(TATATA)4
(TATATA)5
TATC
TC
TC
TC
TC
TC
TC
TC
TC
(TC)12
(TC)12
(TC)12
(TC)12
(TC)16
(TC)16
(TC)20
(TC)6
(TC)6
(TC)6
(TC)6
(TC)6
(TC)6
(TC)6
(TC)6
(TC)7
(TC)7
(TC)7
(TC)7
(TC)7
(TC)7
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
(TC)8
TCA
TCA
(TCA)4
(TCA)4
(TCA)4
(TCA)5
(TCA)6
(TCAC)4
(TCC)4
(TCC)4
(TCC)4
(TCC)4
(TCC)4
(TCC)5
(TCC)6
(TCC)6
(TCC)7
(TCC)7
(TCCA)4
TCCC
(TCCT)4
(TCCTG)4
(TCG)4
(TCG)4
(TCG)4
(TCG)5
(TCG)5
(TCG)5
(TCG)6
(TCG)6
(TCG)6
(TCGA)4
(TCGC)4
(TCGCA)4
(TCGCC)4
(TCGGC)4
(TCGTCC)4
(TCT)4
(TCT)5
(TCT)5
(TCTC)4
(TCTC)4
(TCTC)4
(TCTC)5
(TCTC)5
(TCTCC)4
(TCTCTCTC)4
(TCTCTCTC)4
(TCTG)4
(TCTG)5
(TCTT)4
TG
TG
TG
TG
TG
TG
(TG)10
(TG)12
(TG)13 (AG)29
(TG)36
(TG)4
(TG)6
(TG)6
(TG)6
(TG)6
(TG)6
(TG)6
(TG)6
(TG)6
(TG)6
(TG)7
(TG)7
(TG)8
(TG)8
(TG)8
(TG)8
(TG)8
(TG)8
TGA
(TGA)6
(TGAC)4
(TGAC)4
TGAGCG
TGC
TGC
TGC
(TGC)4
(TGC)4
(TGC)4
(TGC)4
(TGC)4
(TGC)4
(TGC)4
(TGC)5
(TGC)5
(TGC)5
(TGC)5
(TGC)5
(TGC)5
(TGC)6
(TGC)6
(TGCA)4
(TGCCA)4
(TGCCA)5
(TGCG)4
(TGCG)4
(TGCG)6
(TGG)4
(TGG)4
(TGG)4
(TGG)6
(TGG)6
(TGG)6
(TGG)7
(TGG)7
(TGGA)5
(TGGCTC)4
(TGGT)4
(TGGT)4
(TGGT)5
(TGT)4
(TGT)6
(TGTCC)4
(TGTGTGTG)4
tri
tri
TTA
(TTA)4
(TTA)5
(TTA)6
TTC
(TTC)12
(TTC)4
(TTC)4
(TTC)4
(TTC)4
(TTC)4
(TTC)5
(TTC)6
(TTC)6
(TTC)65
(TTC)80
(TTCA)7
TTCC
(TTCG)4
(TTCT)5
TTCT-GTAT
(TTCTT)4
(TTG)14
(TTG)14
(TTG)4
(TTG)5
(TTG)5
(TTG)5
(TTG)6
(TTG)8
(TTTA)4
(TTTC)4
(TTTC)4
(TTTG)4
(TTTG)6
(TTTTG)4